SRR10501693

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

Asian honeybee bulk RNA-seq (grade A, excellent). High Q30 at 93.4% and mean quality of 35.9 ensure reliable base-to-base accuracy, with well-controlled duplication at 23%; this dataset is production-ready for quantification and analysis.

Data type / assay

bulk-RNA-seq

Organism

Apis cerana

Instrument

Illumina HiSeq 2500

Platform

ILLUMINA

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

1 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 7556778000 reported

total reads 25189260 reported

n content pct 0.001 measured

pct q20 bases 97.6 measured

pct q30 bases 93.4 measured

gc content pct 38 measured

mean read length 150 measured

mean base quality 35.9 measured

adapter content pct 0.93 measured

duplication rate pct 23.19 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.4 measured ×1 100%

mean base quality 35.9 measured ×0.6 100%

adapter content pct 0.93 measured ×0.4 100%

duplication rate pct 23.19 measured ×0.4 100%

QC cost 36 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0