Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR10902668

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

97/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This BGISEQ-500 bulk RNA-seq from Bombyx mori comprises 43.1 million short reads totaling 6.5 billion bases at very good quality (97.3% ≥Q20, 89.8% ≥Q30). The minimal N content and 45.9% GC composition support reliable sequencing. The substantial read depth enables gene expression profiling and differential expression studies in this silkworm model organism.

Data type / assay
bulk-RNA-seq
Organism
Bombyx mori
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 6460788600 reported
total reads 43071924 reported
n content pct 0.001 measured
pct q20 bases 97.3 measured
pct q30 bases 89.8 measured
gc content pct 45.9 measured
mean read length 150 measured
mean base quality 34.9 measured
adapter content pct 0 measured
duplication rate pct 35.99 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 97/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 89.8 measured ×1 99%
mean base quality 34.9 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 35.99 measured ×0.4 87%
QC cost 16 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0