Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR10902671

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

95/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This BGISEQ-500 bulk RNA-seq from Bombyx mori comprises 40.7 million short reads totaling 6.1 billion bases at good quality (96.5% ≥Q20, 87.8% ≥Q30). The minimal N content and 41.3% GC composition indicate reliable sequencing. The substantial read depth enables gene expression profiling and differential expression studies in this important silkworm model organism.

Data type / assay
bulk-RNA-seq
Organism
Bombyx mori
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 6104798400 reported
total reads 40698656 reported
n content pct 0.029 measured
pct q20 bases 96.5 measured
pct q30 bases 87.8 measured
gc content pct 41.3 measured
mean read length 150 measured
mean base quality 34.5 measured
adapter content pct 0 measured
duplication rate pct 18.13 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 95/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 87.8 measured ×1 89%
mean base quality 34.5 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 18.13 measured ×0.4 100%
QC cost 10 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0