SRR11095786

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

97/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

This BGISEQ-500 miRNA-seq from Aedes albopictus comprises 22.7 million short reads totaling 621 million bases at exceptional quality (99.1% ≥Q20, 93.2% ≥Q30). The minimal N content and 48.4% GC composition indicate clean small RNA sequencing. This substantial-depth miRNA-seq dataset enables comprehensive microRNA profiling in this disease vector mosquito.

Data type / assay

bulk-RNA-seq

Organism

Aedes albopictus

Instrument

BGISEQ-500

Platform

BGISEQ

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

1 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 620858034 reported

total reads 22730043 reported

n content pct 0.001 measured

pct q20 bases 99.1 measured

pct q30 bases 93.2 measured

gc content pct 48.4 measured

mean read length 27.3 measured

mean base quality 35.6 measured

adapter content pct 0 measured

duplication rate pct 37.85 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 97/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.2 measured ×1 100%

mean base quality 35.6 measured ×0.6 100%

adapter content pct 0 measured ×0.4 100%

duplication rate pct 37.85 measured ×0.4 83%

QC cost 23 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0