Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR11095790

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

97/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

BGISEQ-500 miRNA-seq from Aedes albopictus yields ~22.7 million short reads (598 million bases, 94% Q30), high coverage ideal for profiling microRNA expression in this invasive mosquito vector. This dataset enables detection of abundant and moderate miRNAs and comparative miRNA studies. miRNA-seq enriches for small RNAs rather than whole transcriptome; reuse suits functional studies of post-transcriptional gene regulation in Aedes albopictus.

Data type / assay
bulk-RNA-seq
Organism
Aedes albopictus
Instrument
BGISEQ-500
Platform
BGISEQ
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 598765706 reported
total reads 22680991 reported
n content pct 0 measured
pct q20 bases 99.1 measured
pct q30 bases 94 measured
gc content pct 49.6 measured
mean read length 26.4 measured
mean base quality 35.7 measured
adapter content pct 0 measured
duplication rate pct 38.1 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 97/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 94 measured ×1 100%
mean base quality 35.7 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 38.1 measured ×0.4 82%
QC cost 32 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0