← Dataset search
SRR13070600
SRAProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
97/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
Drosophila malerkotliana malerkotliana
Instrument
MinION
Platform
OXFORD_NANOPORE
Read type
long-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
gc sd
5.55
measured
checksum ok
yes
reported
total bases
9694176884
reported
total reads
685314
reported
n content pct
0
measured
pct q20 bases
49.4
measured
pct q30 bases
16.4
measured
pct reads q30
0
measured
sampled bases
52259657
measured
sampled reads
3156
measured
gc content pct
41.3
measured
polyg tail pct
0
measured
read length sd
18427.9
measured
quality dropoff
8.2
measured
read length max
177766
measured
read length min
160
measured
read length n50
22898
measured
max base quality
90
measured
mean read length
16558.8
measured
max n pct per pos
0
measured
mean base quality
19
measured
pct reads lt 100bp
0
measured
read length median
11095.5
measured
adapter content pct
0
measured
median read quality
19
measured
duplication rate pct
0
measured
overrepresented top pct
0.03
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 97/100
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
read length n50
22898
measured
×1
100%
mean base quality
19
measured
×0.8
90%
duplication rate pct
0
measured
×0.5
100%
adapter content pct
0
measured
×0.4
100%
QC cost
8 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0