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SRR13070612
SRAProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
88/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
Lordiphosa stackelbergi
Instrument
MinION
Platform
OXFORD_NANOPORE
Read type
long-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
gc sd
3.21
measured
checksum ok
yes
reported
total bases
12697305526
reported
total reads
2249898
reported
n content pct
0
measured
pct q20 bases
55.3
measured
pct q30 bases
23.8
measured
pct reads q30
0
measured
sampled bases
50569541
measured
sampled reads
4908
measured
gc content pct
37.8
measured
polyg tail pct
0
measured
read length sd
9409.6
measured
quality dropoff
9
measured
read length max
84623
measured
read length min
185
measured
read length n50
14621
measured
max base quality
90
measured
mean read length
10303.5
measured
max n pct per pos
0
measured
mean base quality
20.8
measured
pct reads lt 100bp
0
measured
read length median
7526.5
measured
adapter content pct
0.1
measured
median read quality
21.2
measured
duplication rate pct
0
measured
overrepresented top pct
0.02
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 88/100
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
read length n50
14621
measured
×1
68%
mean base quality
20.8
measured
×0.8
100%
duplication rate pct
0
measured
×0.5
100%
adapter content pct
0.1
measured
×0.4
100%
QC cost
9 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0