SRR13625249

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means

claude:haiku

HiSeq X Ten bulk RNA-Seq of Gonatopus flavifemur parasitoid wasp generated 26.7M reads (8 Gb) with outstanding quality (93.5% Q30, 38.7% GC). This parasitoid transcriptome supports research into host-parasitoid interactions, venom evolution, and biological control mechanisms.

Data type / assay

bulk-RNA-seq

Organism

Gonatopus flavifemur

Instrument

HiSeq X Ten

Platform

ILLUMINA

Read type

short-read

Files available

FASTQ (raw reads)

N numbers (samples, groups)

1 runs

Metrics (value · how obtained)

checksum ok yes reported

total bases 7985358926 reported

total reads 26707305 reported

n content pct 0.003 measured

pct q20 bases 97.8 measured

pct q30 bases 93.5 measured

gc content pct 38.7 measured

mean read length 149.5 measured

mean base quality 35.9 measured

adapter content pct 0.01 measured

duplication rate pct 27.01 measured

How this grade was computed

Weighted mean of 4 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.5 measured ×1 100%

mean base quality 35.9 measured ×0.6 100%

adapter content pct 0.01 measured ×0.4 100%

duplication rate pct 27.01 measured ×0.4 100%

QC cost 57 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0