Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR14130548

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

78/100 · C

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

HiSeq X Ten RNA-seq of the desiccation-tolerant fly *Polypedilum vanderplanki* yields 22.1M reads and 6.68 Gb bases with 98.4% Q20 on a high-throughput platform, enabling comprehensive transcriptome study of anhydrobiosis and stress tolerance mechanisms. Search: *Polypedilum vanderplanki* RNA-seq, desiccation tolerance, chironomid genomics.

Data type / assay
bulk-RNA-seq
Organism
Polypedilum vanderplanki
Instrument
HiSeq X Ten
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 6684202542 reported
total reads 22133121 reported
n content pct 0 measured
pct q20 bases 98.4 measured
pct q30 bases 95.8 measured
gc content pct 38.2 measured
mean read length 151 measured
mean base quality 39.4 measured
adapter content pct 21.12 measured
duplication rate pct 44.53 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 78/100

The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 95.8 measured ×1 100%
mean base quality 39.4 measured ×0.6 100%
adapter content pct 21.12 measured ×0.4 0%
duplication rate pct 44.53 measured ×0.4 68%
QC cost 25 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0