Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR1523630

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

99/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Illumina Genome Analyzer IIx RNA-Seq of Sarcophaga bullata flesh fly yielded 32M reads with high quality (93.9% Q30 bases) and lower GC content (39.4%). This relatively large insect transcriptome dataset enables robust comparative transcriptomics and developmentally-staged gene expression profiling, useful for studying dipteran wound-healing or immune responses.

Data type / assay
bulk-RNA-seq
Organism
Sarcophaga bullata
Instrument
Illumina Genome Analyzer IIx
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 1626799224 reported
total reads 31898024 reported
n content pct 0.008 measured
pct q20 bases 96.3 measured
pct q30 bases 93.9 measured
gc content pct 39.4 measured
mean read length 51 measured
mean base quality 37.2 measured
adapter content pct 0.03 measured
duplication rate pct 32.06 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 99/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.9 measured ×1 100%
mean base quality 37.2 measured ×0.6 100%
adapter content pct 0.03 measured ×0.4 100%
duplication rate pct 32.06 measured ×0.4 95%
QC cost 48 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0