Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
84/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Short-read bulk RNA-seq from Magallana gigas (Pacific oyster), an economically important mollusk, on the HiSeq 2000 with 17.2 million reads at good quality (92.2% Q20, 84.5% Q30) supports transcriptome profiling of development, immune responses, or environmental stress relevant to aquaculture and ecology. The dataset enables comparative expression studies across tissues and conditions in this bivalve model. Quality metrics support reliable transcript abundance quantification.
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0