Corpus 1,282 assessed · 1,183 scored · 647 reproduced ≥75 · 172 flagged ·∅ 74/100
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SRR3932806

SRA first seen 2020

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

88/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

NextSeq 500 whole-genome sequencing (WGS) of Centruroides sculpturatus (Arizona bark scorpion) with 3.9 million reads, 1.18 Gb bases, and 92.9% Q20 (88.7% Q30) provides modest-coverage genome data for this venomous arachnid species with limited prior genomic resources. The 32.6% GC and moderate depth suit genome-assembly scaffolding and comparative genomics more than SNP genotyping or structural-variant discovery.

Data type / assay
WGS
Organism
Centruroides sculpturatus
Instrument
NextSeq 500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 1181895120 reported
total reads 3913560 reported
n content pct 0.049 measured
pct q20 bases 92.9 measured
pct q30 bases 88.7 measured
gc content pct 32.6 measured
mean read length 151 measured
mean base quality 33.5 measured
adapter content pct 5.39 measured
duplication rate pct 10.79 measured
How this grade was computed
Weighted mean of 3 scored metric(s) → 88/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 88.7 measured ×1 94%
duplication rate pct 10.79 measured ×0.5 91%
adapter content pct 5.39 measured ×0.4 69%
QC cost 37 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0