Corpus 1,285 assessed · 1,186 scored · 647 reproduced ≥75 · 174 flagged ·∅ 73.9/100
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SRR5150035

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

91/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

HiSeq 1500 RNA-seq from Musca domestica (17M reads, 2.6 billion bases, 42.8% GC, 93.1% ≥Q30) provides another transcriptome sample from the housefly. Replicate datasets enable identification of tissue-specific expression patterns.

Data type / assay
bulk-RNA-seq
Organism
Musca domestica
Instrument
Illumina HiSeq 1500
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 2553530850 reported
total reads 17023539 reported
n content pct 0.012 measured
pct q20 bases 97.6 measured
pct q30 bases 93.1 measured
gc content pct 42.8 measured
mean read length 150 measured
mean base quality 35.5 measured
adapter content pct 11.81 measured
duplication rate pct 28.82 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 91/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 93.1 measured ×1 100%
mean base quality 35.5 measured ×0.6 100%
adapter content pct 11.81 measured ×0.4 46%
duplication rate pct 28.82 measured ×0.4 100%
QC cost 22 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0