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SRR6348685
SRAProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
56/100 · FStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
Ovis aries
Instrument
PacBio RS II
Platform
PACBIO_SMRT
Read type
long-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
gc sd
7.31
measured
checksum ok
yes
reported
total bases
151337065
reported
total reads
18268
reported
n content pct
0
measured
sampled bases
60553593
measured
sampled reads
7296
measured
gc content pct
42
measured
polyg tail pct
0.03
measured
read length sd
6035.7
measured
quality dropoff
1
measured
read length max
38384
measured
read length min
50
measured
read length n50
13276
measured
max base quality
15
measured
mean read length
8299.6
measured
max n pct per pos
0
measured
mean base quality
10.1
measured
pct reads lt 100bp
0.37
measured
read length median
7510.5
measured
adapter content pct
0
measured
median read quality
10.1
measured
duplication rate pct
0
measured
overrepresented top pct
0.01
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 56/100
The F grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
read length n50
13276
measured
×1
60%
mean base quality
10.1
measured
×0.8
1%
duplication rate pct
0
measured
×0.5
100%
adapter content pct
0
measured
×0.4
100%
QC cost
11 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0