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SRR6348709
SRAProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
57/100 · FStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WGS
Organism
Ovis aries
Instrument
PacBio RS II
Platform
PACBIO_SMRT
Read type
long-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
gc sd
6.48
measured
checksum ok
yes
reported
total bases
866377246
reported
total reads
90118
reported
n content pct
0
measured
sampled bases
58949716
measured
sampled reads
5747
measured
gc content pct
42.3
measured
polyg tail pct
0.02
measured
read length sd
6216.4
measured
quality dropoff
1.1
measured
read length max
40379
measured
read length min
59
measured
read length n50
13691
measured
max base quality
15
measured
mean read length
10257.5
measured
max n pct per pos
0
measured
mean base quality
9.4
measured
pct reads lt 100bp
0.1
measured
read length median
9722
measured
adapter content pct
0
measured
median read quality
9.4
measured
duplication rate pct
0.02
measured
overrepresented top pct
0.03
measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 57/100
The F grade is a transparent weighted average. Each metric below scored from 0–100% against the published WGS thresholds, weighted by its importance; nothing is hidden or subjective.
read length n50
13691
measured
×1
63%
mean base quality
9.4
measured
×0.8
0%
duplication rate pct
0.02
measured
×0.5
100%
adapter content pct
0
measured
×0.4
100%
QC cost
11 s compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0