Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
75/100 · CStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
RNA-Seq (Illumina Genome Analyzer IIx, Homo sapiens), grade C. Paradoxical: pct_q30_bases=100 masks borderline mean_base_quality=30, and moderate duplication (51.68%) is the bright spot. Legacy sequencer undermines actual base reliability despite Q-score inflation. Evidence strength is low; marginal for reuse.
The C grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0
Scientific quality
Based on hands-on reproduction of the papers that use this dataset. A reproducible paper that stands on this data is positive evidence; a flagged one is a prompt to look closer — never a verdict on the dataset itself without the evidence.