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SRR8517927
SRAProvenance — who produced it, who reused it
Linked to 0 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
No linked papers found in the corpus yet.
Deep data QC
87/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Data type / assay
WES
Organism
Homo sapiens
Instrument
HiSeq X Ten
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok
yes
reported
total bases
12829915200
reported
total reads
42766384
reported
n content pct
0.004
measured
pct q20 bases
97.6
measured
pct q30 bases
94
measured
gc content pct
53.7
measured
mean read length
150
measured
mean base quality
39.4
measured
adapter content pct
17.24
measured
duplication rate pct
5.11
measured
mean target coverage
206.9
extrapolated
How this grade was computed
Weighted mean of 4 scored metric(s) → 87/100
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published WES thresholds, weighted by its importance; nothing is hidden or subjective.
mean target coverage
206.9
extrapolated
×1.2
100%
pct q30 bases
94
measured
×1
100%
duplication rate pct
5.11
measured
×0.5
100%
adapter content pct
17.24
measured
×0.4
0%
QC cost
16.4 min compute
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0