Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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SRR915837

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

94/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This second Ceratitis capitata RNA-Seq on HiSeq 2000 covers 1.4 Gb with 9.2 million reads and good quality (95.6% Q20, 89.8% Q30), providing replicate or developmental-condition-specific data for this fruit-fly pest. Both C. capitata samples enable comparative expression analysis. Insect pest biology can integrate both Mediterranean fruit-fly datasets.

Data type / assay
bulk-RNA-seq
Organism
Ceratitis capitata
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 1399562040 reported
total reads 9207645 reported
n content pct 0.01 measured
pct q20 bases 95.6 measured
pct q30 bases 89.8 measured
gc content pct 35.7 measured
mean read length 76 measured
mean base quality 35.7 measured
adapter content pct 0.06 measured
duplication rate pct 44.36 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 94/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 89.8 measured ×1 99%
mean base quality 35.7 measured ×0.6 100%
adapter content pct 0.06 measured ×0.4 100%
duplication rate pct 44.36 measured ×0.4 68%
QC cost 13 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0