Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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SRR915852

SRA first seen 2021

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

95/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This Ceratitis capitata (Mediterranean fruit fly) bulk RNA-Seq on HiSeq 2000 spans 2.1 Gb with 13.6 million reads and good quality (95.4% Q20, 89.5% Q30), providing transcriptome data for this economically important insect pest. The dataset enables expression profiling related to development, reproduction, and pest-control strategies. Insect molecular biology and pest-management studies can use this fruit-fly RNA-seq.

Data type / assay
bulk-RNA-seq
Organism
Ceratitis capitata
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 2065226280 reported
total reads 13587015 reported
n content pct 0.01 measured
pct q20 bases 95.4 measured
pct q30 bases 89.5 measured
gc content pct 35.3 measured
mean read length 76 measured
mean base quality 35.6 measured
adapter content pct 0.06 measured
duplication rate pct 41.05 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 95/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 89.5 measured ×1 98%
mean base quality 35.6 measured ×0.6 100%
adapter content pct 0.06 measured ×0.4 100%
duplication rate pct 41.05 measured ×0.4 75%
QC cost 18 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0