Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
83/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Arabidopsis thaliana bulk RNA-seq via Illumina HiSeq 2000 with exceptional quality (99.1% Q20, 97.3% Q30) from 149.5M reads at deep coverage (7.6B bases). Enables discovery of rare transcripts, splice variants, and tissue-specific expression patterns in this model plant. High-depth short-read RNA-seq is excellent for transcriptome assembly, ortholog discovery, and reference-annotation refinement in plant molecular biology.
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0