Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
83/100 · BStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
Xiphophorus birchmanni bulk RNA-seq via Illumina HiSeq 4000 with 291M reads at excellent quality (97.4% Q20, 96% Q30) spanning 46B bases. Enables comparative transcriptomics, sex-determination pathway analysis, and divergence studies in this fish model relevant to evolutionary developmental biology. High-depth short-read RNA-seq suited for fish developmental genetics, sex-bias transcriptomics, and ortholog discovery across vertebrate lineages.
The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0