Provenance — who produced it, who reused it
Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.
1 further paper cites this accession but reuse could not be confirmed.
Deep data QC
100/100 · AStandardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured
This amplicon sequencing of Sus scrofa (pig) on HiSeq 1000 spans 1.06 Gb with 4.2 million reads and good quality (96.7% Q20, 93.5% Q30), targeting specific genomic regions of interest. The targeted amplicon approach concentrates sequencing depth on predetermined loci, ideal for SNP genotyping or copy-number studies in livestock. Agricultural genomics and livestock-breeding studies can apply this amplicon-seq dataset to monitor allelic variation at agronomically important loci.
The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published amplicon thresholds, weighted by its importance; nothing is hidden or subjective.
measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0