Corpus 1,283 assessed · 1,184 scored · 647 reproduced ≥75 · 173 flagged ·∅ 73.9/100
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SRX4908948

ENA first seen 2019

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

100/100 · A

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

This terrestrial-metagenome amplicon on Illumina MiSeq spans 14 Gb with 24.3 million reads and perfect quality (100% Q20 and Q30), delivering exceptional-quality targeted bacterial profiling from environmental soil or compost samples. The massive amplicon-seq depth and pristine accuracy enable rare-taxa detection and abundance quantification. Environmental and soil microbiology can use this large-scale, high-quality amplicon dataset.

Data type / assay
amplicon
Organism
terrestrial metagenome
Instrument
Illumina MiSeq
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
1 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 14041015397 reported
total reads 24348000 reported
n content pct 0 measured
pct q20 bases 100 measured
pct q30 bases 100 measured
gc content pct 34.6 measured
mean read length 288.8 measured
mean base quality 30 measured
adapter content pct 0.75 measured
duplication rate pct 71.17 measured
How this grade was computed
Weighted mean of 2 scored metric(s) → 100/100

The A grade is a transparent weighted average. Each metric below scored from 0–100% against the published amplicon thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 100 measured ×1 100%
adapter content pct 0.75 measured ×0.5 100%
QC cost 19 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0