Corpus 1,272 assessed · 1,173 scored · 643 reproduced ≥75 · 168 flagged ·∅ 74.1/100
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SRX747635

ENA first seen 2015

Provenance — who produced it, who reused it

Linked to 1 papers in the literature. Roles are inferred factual signals (who deposited the data vs who reused it), with counts — never a judgement about any author.

Reused by

1 further paper cites this accession but reuse could not be confirmed.

Deep data QC

83/100 · B

Standardized, field-standard QC computed by touching the data — every metric states how it was obtained · evidence: measured

What this means
claude:haiku

Human miRNA-seq profiled on Illumina HiSeq 2000 captured 123.9 million short reads with outstanding quality (98.7% ≥Q20, 96.1% ≥Q30). The high confidence and large read count support sensitive detection of microRNA expression across diverse abundance levels in human tissues.

Data type / assay
bulk-RNA-seq
Organism
Homo sapiens
Instrument
Illumina HiSeq 2000
Platform
ILLUMINA
Read type
short-read
Files available
FASTQ (raw reads)
N numbers (samples, groups)
2 runs
Metrics (value · how obtained)
checksum ok yes reported
total bases 3970776071 reported
total reads 123917016 reported
n content pct 0 measured
pct q20 bases 98.7 measured
pct q30 bases 96.1 measured
gc content pct 50.8 measured
mean read length 31.9 measured
mean base quality 37.1 measured
adapter content pct 0 measured
duplication rate pct 97.73 measured
How this grade was computed
Weighted mean of 4 scored metric(s) → 83/100

The B grade is a transparent weighted average. Each metric below scored from 0–100% against the published bulk-RNA-seq thresholds, weighted by its importance; nothing is hidden or subjective.

pct q30 bases 96.1 measured ×1 100%
mean base quality 37.1 measured ×0.6 100%
adapter content pct 0 measured ×0.4 100%
duplication rate pct 97.73 measured ×0.4 0%
QC cost 17 s compute

measured = computed from the data · extrapolated/reported = derived or from the repository · dq-1.0