Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Spatial Transcriptomics of Human Decidua Identifies Molecular Signatures in Recurrent Pregnancy Loss.
PMID 41031483 · PMC13242933 · Genomics, proteomics & bioinformatics · 2026 · 7 claims · 8 setups
The human decidua contains two coherent spatial domains, the implantation zone (IZ) and glandular-secretory zone (GZ), corresponding to the decidua compacta and spongiosa
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Serial Spatial Transcriptomes Reveal Regulatory Transitions in Maize Leaf Development.
PMID 41493197 · PMC13110159 · Plant biotechnology journal · 2026 · 8 claims · 5 setups
An optimised Visium spatial transcriptomics protocol (two-step OCT embedding combined with OCT-Immersion First cryopreservation) preserves high-integrity RNA from fragile plant tissues such as SAM
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STAN, a computational framework for inferring spatially informed transcription factor activity.
PMID 41521668 · PMC12784991 · Nucleic acids research · 2026 · 7 claims · 7 setups
STAN, a linear mixed-effects (spatially weighted regression) model, integrates TF-target gene priors, gene expression, spatial coordinates, and histological image features to predict spot-specific TF activity in spatial transcriptomics data
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sCellST predicts single-cell gene expression from H& E images.
PMID 41513659 · PMC12858858 · Nature communications · 2026 · 7 claims · 6 setups
sCellST is a weakly supervised (Multiple Instance Learning) deep learning framework that predicts single-cell gene expression from H&E images alone, trained using paired spatial transcriptomics (Visium) and H&E slides