Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 5

System / cell line: sampling ✕ Assay: 16s ✕ Clear

Bioavailable Nutrients (N and P) and Precipitation Patterns Drive Cyanobacterial Blooms in Missisquoi Bay, Lake Champlain.

PMID 34683418 · PMC8537112 · Microorganisms · 2021 · 8 claims · 8 setups

Has reproduction · 67

High concentrations of N and P were typically measured in April and May, before blooms occurred.

water filtered lugol's-iodine-preserved 16s 16s nutrient situ
Microbial community dynamics over large spatial and environmental gradients in a subtropical ocean basin.

PMID 41568968 · PMC12915303 · Applied and environmental microbiology · 2026 · 8 claims · 7 setups

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Cluster analysis of 18S (and similarly 16S) community data revealed three clusters corresponding to depth zones: photic zone, deep chlorophyll maximum (DCM), and aphotic zone

seawater sterivex-filtered extracted log-transformed metabarcoding hydrographic extraction
The vaginal bacterial communities of Japanese women resemble those of women in other racial groups.

PMID 19912342 · PMC2868947 · FEMS immunology and medical microbiology · 2010 · 7 claims · 5 setups

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The types of vaginal bacterial communities found in Japanese women closely resemble those previously found in White and Black North American women.

vaginal japanese t-rflp clone cluster
Seasonal Dynamics Are the Major Driver of Microbial Diversity and Composition in Intensive Freshwater Aquaculture.

PMID 34248892 · PMC8264503 · Frontiers in microbiology · 2021 · 7 claims · 6 setups

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Natural seasonality is the primary driver of aquatic bacterial community structure in the fishponds and reservoir

pond filtered phytoplankton common 16s photosynthetic inorganic
Evaluation of the bacterial diversity among and within individual venous leg ulcers using bacterial tag-encoded FLX and titanium amplicon pyrosequencing and metagenomic approaches.

PMID 19860898 · PMC2773781 · BMC microbiology · 2009 · 7 claims · 5 setups

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VLU infections are polymicrobial with no single bacterium colonizing the wounds

individual pooled second btefap quantitative bulk

Experiments

Bioavailable Nutrients (N and P) and Precipitation Patterns Drive Cyanobacterial Blooms in Missisquoi Bay, Lake Champlain.

Microbial community dynamics over large spatial and environmental gradients in a subtropical ocean basin.

The vaginal bacterial communities of Japanese women resemble those of women in other racial groups.

Seasonal Dynamics Are the Major Driver of Microbial Diversity and Composition in Intensive Freshwater Aquaculture.

Evaluation of the bacterial diversity among and within individual venous leg ulcers using bacterial tag-encoded FLX and titanium amplicon pyrosequencing and metagenomic approaches.