Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Aged murine bone marrow myeloid and mesenchymal cells develop unique senescence phenotypes.

  PMID 41592025 · PMC13038201 · The Journal of clinical investigation · 2026 · 7 claims · 8 setups

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  Myeloid-lineage cells (monocytes, macrophages, myeloid progenitors) show the highest expression of p16 and SASP markers among bone marrow immune cell types in aged mice

  bone femur skeletal single-cell mass cytof

• Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis.

  PMID 34079055 · PMC8172904 · Communications biology · 2021 · 8 claims · 8 setups

  Has reproduction · 96

  Integration of five mouse scRNAseq datasets reveals a trifurcating lineage trajectory originating from embryonic mammary stem cells (MaSCs) that differentiates into three epithelial lineages (Basal, L-Alv, L-Hor) via unipotent progenitor clusters

  mammary surgically normal single-cell whole-mount integration

• Minimal correlation but complementary diagnostic utility for plasma cell-free RNA and proteins.

  PMID 41826701 · PMC13125234 · Communications medicine · 2026 · 6 claims · 6 setups

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  Plasma cfRNA and protein levels are largely uncorrelated, both globally across samples and at the individual feature level

  plasma matched cfrna differentially cell-free somascan differential

• Immunopeptidome profiling in pulmonary fibrosis provides a platform for identifying therapeutic targets.

  PMID 42010059 · PMC13132728 · Nature immunology · 2026 · 6 claims · 8 setups

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  IPF fibrotic lung tissue shows an expanded and distinct HLA class I immunopeptidome compared to non-IPF lung tissue, enriched for peptides from fibroblast/macrophage-derived proteins involved in tissue remodeling

  ipf tabula lung blm hla high-resolution scrna-seq

• The gene expression landscape of disease genes.

  PMID 41664080 · PMC12983648 · Genome biology · 2026 · 8 claims · 8 setups

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  In tissues and cell types with established disease relevance, disease genes show higher and more specific gene expression than control genes

  gtex pubmed tabula archs4 differential magma anderson-darling

• Cross-ancestry genome-wide association studies of liver function biomarkers uncover pleiotropic variants, systemic disease links and therapeutic targets.

  PMID 41689074 · PMC13005531 · Genome medicine · 2026 · 8 claims · 8 setups

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  5,507 lead signals (P<5x10^-9) were identified for seven LFQBs across ancestries, including 210 novel loci

  hope biobank combined cross-ancestry gwas cross-ancestry functional-informed