Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Scalable nonparametric clustering with unified marker gene selection for single-cell RNA-seq data.

  PMID 41825449 · PMC13030991 · Cell reports methods · 2026 · 7 claims · 3 setups

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  NCLUSION matches the performance of state-of-the-art single-cell clustering techniques with significantly reduced runtime

  brain-large scdesign3-simulated facs-purified scrna-seq simulated

• PreTSA: computationally efficient modeling of temporal and spatial gene expression patterns.

  PMID 41673899 · PMC12998178 · Genome biology · 2026 · 7 claims · 8 setups

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  PreTSA dramatically reduces computational time and memory versus GAM (Monocle, TSCAN) and PseudotimeDE for identifying temporally variable genes (TVGs) while producing highly similar results

  simulated null pbmc pancreas pseudotime tvg false-positive