Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Full-text index only
Grammar-based distance in progressive multiple sequence alignment.
PMID 18616828 · PMC2478692 · BMC bioinformatics · 2008 · 7 claims · 3 setups
A grammar-based (LZ complexity) distance metric can be used to determine the order in which sequences are progressively pairwise aligned
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Has reproduction · 61
TEMP: a computational method for analyzing transposable element polymorphism in populations.
PMID 24753423 · PMC4066757 · Nucleic acids research · 2014 · 8 claims · 8 setups
TEMP combines pair-end (discordant) read and split (soft-clipped) read information to identify both presence and absence of TE insertions in genomic DNA from heterogeneous/pooled samples.
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Has reproduction · 92
Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration.
PMID 34773081 · PMC8589952 · Communications biology · 2021 · 8 claims · 7 setups
Large-scale integration of 111 sc/snRNAseq datasets captures rare, transitional myogenic progenitor states (commitment and fusion) that are poorly represented in individual datasets.
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Has reproduction · 44
A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia Beetles.
PMID 41022899 · PMC12480477 · Scientific data · 2025 · 6 claims · 6 setups
A reference DNA barcode library of fungi associated with over 1000 UK bark and ambrosia beetles (25 native Scolytinae species) was generated, yielding 5274 identified fungal OTUs.