Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Transcriptomic Adjustments of Staphylococcus aureus COL (MRSA) Forming Biofilms Under Acidic and Alkaline Conditions.

  PMID 31681245 · PMC6813237 · Frontiers in microbiology · 2019 · 5 claims · 5 setups

  Has reproduction · 73

  S. aureus COL (MRSA) survives and grows well under acidic (pH5) and alkaline (pH9) conditions, both planktonically and as a biofilm

  aureus microarray colony extraction

• GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses.

  PMID 33758032 · PMC8547006 · mSystems · 2021 · 8 claims · 7 setups

  Has reproduction · 70

  GAUGE automatically annotates GEO microbial transcriptomic data sets (microarray and RNA-seq), increasing the proportion of annotatable studies from 4% to 33%

  microarray rna-seq aeruginosa mantel manual anova