Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results.
PMID 15005801 · PMC341449 · BMC bioinformatics · 2004 · 7 claims · 3 setups
An XML schema called Annotated Gel Markup Language (AGML) is proposed to manage, analyze, and disseminate annotated 2D gel electrophoresis and MS results.
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An open-source representation for 2-DE-centric proteomics and support infrastructure for data storage and analysis.
PMID 18179696 · PMC2231339 · BMC bioinformatics · 2008 · 8 claims · 4 setups
AGML 2.0 is a comprehensive XML representation for 2-DE experiments comprising identification, protocol (MI2DG), and gel sections
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Multidimensional proteomics analysis of amniotic fluid to provide insight into the mechanisms of idiopathic preterm birth.
PMID 18431506 · PMC2315798 · PloS one · 2008 · 7 claims · 7 setups
A novel 5-peak SELDI proteomic signature (Q-profile) in the 10-12.5 kDa mass range identifies a subgroup of women at risk for preterm birth without intra-amniotic inflammation or bleeding.
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Molecular markers of preterm labor in the choriodecidua.
PMID 20009011 · PMC2852874 · Reproductive sciences (Thousand Oaks, Calif.) · 2010 · 8 claims · 4 setups
Preterm choriodecidua displays distinct gene and protein expression patterns associated with preterm labor