Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• SVC: structured visualization of evolutionary sequence conservation.

  PMID 15991338 · PMC1160265 · Nucleic acids research · 2005 · 7 claims · 5 setups

  Full-text index only

  SVC aligns protein-coding sequences of orthologous gene pairs and maps them back onto their encoding exons/introns to generate a scaffold of conserved gene structure.

  orthologous exonic tblastx blastn sliding-window

• piRNABank: a web resource on classified and clustered Piwi-interacting RNAs.

  PMID 17881367 · PMC2238943 · Nucleic acids research · 2008 · 6 claims · 4 setups

  Full-text index only

  piRNABank is a web-accessible database storing empirically known piRNA sequences and annotations for human, mouse and rat.

  pirna mapped sequence genome sliding-window