Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 124

Assay: busco ✕ Clear

The genome sequence of the Mediterranean Skipper, Gegenes nostrodamus (Fabricius, 1793) (Lepidoptera: Hesperiidae).

PMID 41908929 · PMC13019046 · Wellcome open research · 2026 · 6 claims · 7 setups

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A chromosome-level genome assembly was generated for Gegenes nostrodamus (Mediterranean Skipper) as part of Project Psyche.

gegenes pacbio hi-c k-mer
The genome sequence of the Madeiran Speckled Wood, Pararge xiphia Hübner, 1819 (Lepidoptera: Nymphalidae).

PMID 41908930 · PMC13022564 · Wellcome open research · 2026 · 6 claims · 8 setups

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A chromosome-level genome assembly was generated for a male Pararge xiphia specimen, containing two haplotypes of 528.41 Mb and 523.51 Mb

organism pacbio assembled pacbio hi-c k-mer
The genome sequence of the Eastern Rock Grayling, Hipparchia syriaca (Staudinger, 1871) (Lepidoptera: Nymphalidae).

PMID 41913757 · PMC13033134 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was generated for Hipparchia syriaca (Eastern Rock Grayling) from a female specimen collected in Măcin, Romania

organism pacbio assembled pacbio hi-c k-mer
The chromosomal genome sequence of the buttercup lucine, Anodontia alba Link, 1807 (Lucinida: Lucinidae) and its associated microbial metagenome sequences.

PMID 41913758 · PMC13033139 · Wellcome open research · 2026 · 6 claims · 7 setups

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Genome assembly of Anodontia alba (buttercup lucine) with total length 1,862.85 Mb, 99.28% scaffolded into 18 chromosomal pseudomolecules

anodontia microbial pacbio hi-c sequencing
The genome sequence of the Oriental Meadow Brown, Cercyonis lupina (Lepidoptera: Nymphalidae).

PMID 41924386 · PMC13036442 · Wellcome open research · 2026 · 8 claims · 8 setups

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Genome of Cercyonis lupina assembled into two haplotypes with total lengths of 508.65 Mb (haplotype 1) and 467.75 Mb (haplotype 2)

organism pacbio assembled scaffolded pacbio hi-c k-mer
The genome sequence of a parasitoid wasp, Netelia inedita (Kokujev, 1899) (Hymenoptera: Ichneumonidae).

PMID 41938268 · PMC13049423 · Wellcome open research · 2026 · 7 claims · 8 setups

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A genome assembly was generated for a female Netelia inedita specimen as part of the Darwin Tree of Life project

netelia assembled pacbio hi-c sequencing
The genome sequence of a window fly, Scenopinus jerei Pohjoismäki & Haarto, 2021 (Diptera: Scenopinidae).

PMID 41953045 · PMC13054250 · Wellcome open research · 2026 · 8 claims · 8 setups

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This assembly provides the first genomic resource for the family Scenopinidae (window flies)

organism idscejere3 assembled pacbio hi-c rna-seq
The genome sequence of the sweet violet, Viola odorata L. (Malpighiales: Violaceae).

PMID 41960579 · PMC13058574 · Wellcome open research · 2026 · 8 claims · 8 setups

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The Viola odorata genome assembly has a total length of 698.62 megabases, with 99.9% scaffolded into 10 chromosomal pseudomolecules.

viola flow barcoding pacbio
The genome sequence of the chocolate mining bee, Andrena scotica Perkins, 1916 (Hymenoptera: Andrenidae).

PMID 41960580 · PMC13058575 · Wellcome open research · 2026 · 7 claims · 8 setups

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A haploid chromosome-level genome assembly was generated for a male Andrena scotica (chocolate mining bee) specimen.

andrena pacbio hi-c rna-seq
The genome sequence of a hoverfly , Melangyna compositarum (Verrall, 1873) (Diptera: Syrphidae).

PMID 41971599 · PMC13069379 · Wellcome open research · 2026 · 7 claims · 8 setups

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A genome assembly was generated for a single male Melangyna compositarum hoverfly specimen (idMelComo1) as part of the Darwin Tree of Life project.

melangyna barcoding high pacbio
The chromosomal genome sequence of the tubeworm, Lamellibrachia columna Southward, 1991 (Sabellida: Siboglinidae).

PMID 41993727 · PMC13080331 · Wellcome open research · 2026 · 8 claims · 8 setups

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The Lamellibrachia columna genome assembly spans 879.73 Mb, with 99.96% scaffolded into 15 chromosomal pseudomolecules

lamellibrachia columna filtered assembled pacbio hi-c sequencing
The genome sequence of the Roundleaf geranium, Geranium rotundifolium L. (Geraniales: Geraniaceae).

PMID 42021764 · PMC13096780 · Wellcome open research · 2026 · 8 claims · 8 setups

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The genome assembly of Geranium rotundifolium has a total length of 497.00 megabases, with 97.57% scaffolded into 13 chromosomal pseudomolecules.

leaf silica-dried pacbio alternate flow barcoding pacbio
The genome sequence of the Acorn Weevil, Curculio glandium (T.Marsham, 1802) (Coleoptera: Curculionidae).

PMID 42021765 · PMC13096787 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosomally complete genome assembly was produced for Curculio glandium (Acorn Weevil) as part of the Darwin Tree of Life project

curculio assembled alternate pacbio hi-c sequencing
The genome sequence of the Northern Grizzled Skipper, Pyrgus centaureae (Rambur, 1839) (Lepidoptera: Hesperiidae).

PMID 42038589 · PMC13109703 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was produced for Pyrgus centaureae (Northern Grizzled Skipper) as part of Project Psyche.

pyrgus pacbio hi-c rna-seq
The genome sequence of a greenbottle fly, Lucilia caesar (Linnaeus, 1758) (Diptera: Calliphoridae).

PMID 42064354 · PMC13125994 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosomally complete genome assembly was generated for a male Lucilia caesar specimen, with total length 615.55 Mb

organism head abdomen dissected pacbio hi-c sequencing
The genome sequence of the Woodland Grayling, Hipparchia fagi (Scopoli, 1763) (Lepidoptera: Nymphalidae).

PMID 42078576 · PMC13133624 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level, haplotype-resolved genome assembly was produced for Hipparchia fagi (Woodland Grayling) as part of Project Psyche.

organism pacbio computational assembled pacbio hi-c k-mer
The genome sequence of the nematode Ostertagia ostertagi (Stiles, 1892) (Rhabditida, Trichostrongylidae).

PMID 42094077 · PMC13139848 · Wellcome open research · 2026 · 8 claims · 7 setups

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A chromosome-level genome assembly was generated for a single male specimen of Ostertagia ostertagi (isolate MOo2).

single pooled unassembled assembled pacbio hi-c k-mer
The genome sequence of the Figwort Mason Wasp, Symmorphus gracilis (Brulle, 1832) (Hymenoptera: Vespidae).

PMID 42109708 · PMC13153769 · Wellcome open research · 2026 · 6 claims · 8 setups

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A chromosome-level genome assembly was generated for Symmorphus gracilis, comprising two haplotypes (220.03 Mb and 217.14 Mb), with haplotype 1 scaffolded to 6 chromosomal pseudomolecules

symmorphus head genomic hifi barcoding hmw pacbio
The genome sequence of the Atlantic white-sided dolphin, Leucopleurus acutus (Gray, 1828) (Artiodactyla: Delphinidae).

PMID 42116831 · PMC13157609 · Wellcome open research · 2026 · 8 claims · 7 setups

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A chromosomal-level genome assembly was produced for Leucopleurus acutus (Atlantic white-sided dolphin) as part of the Darwin Tree of Life project

leucopleurus pacbio hi-c rna-seq
The chromosomal genome sequence of the moon jellyfish, Aurelia sp. 4 Dawson et al. 2005 (Semaeostomeae: Ulmaridae) and its associated microbial metagenome sequences.

PMID 42116832 · PMC13157608 · Wellcome open research · 2026 · 7 claims · 8 setups

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Aurelia sp. 4 chromosomal genome assembly has a total length of 462.10 Mb with 99.99% of sequence scaffolded into 21 chromosomal pseudomolecules

aurelia microbial pacbio hi-c rna-seq

Experiments

The genome sequence of the Mediterranean Skipper, Gegenes nostrodamus (Fabricius, 1793) (Lepidoptera: Hesperiidae).

The genome sequence of the Madeiran Speckled Wood, Pararge xiphia Hübner, 1819 (Lepidoptera: Nymphalidae).

The genome sequence of the Eastern Rock Grayling, Hipparchia syriaca (Staudinger, 1871) (Lepidoptera: Nymphalidae).

The chromosomal genome sequence of the buttercup lucine, Anodontia alba Link, 1807 (Lucinida: Lucinidae) and its associated microbial metagenome sequences.

The genome sequence of the Oriental Meadow Brown, Cercyonis lupina (Lepidoptera: Nymphalidae).

The genome sequence of a parasitoid wasp, Netelia inedita (Kokujev, 1899) (Hymenoptera: Ichneumonidae).

The genome sequence of a window fly, Scenopinus jerei Pohjoismäki & Haarto, 2021 (Diptera: Scenopinidae).

The genome sequence of the sweet violet, Viola odorata L. (Malpighiales: Violaceae).

The genome sequence of the chocolate mining bee, Andrena scotica Perkins, 1916 (Hymenoptera: Andrenidae).

The genome sequence of a hoverfly , Melangyna compositarum (Verrall, 1873) (Diptera: Syrphidae).

The chromosomal genome sequence of the tubeworm, Lamellibrachia columna Southward, 1991 (Sabellida: Siboglinidae).

The genome sequence of the Roundleaf geranium, Geranium rotundifolium L. (Geraniales: Geraniaceae).

The genome sequence of the Acorn Weevil, Curculio glandium (T.Marsham, 1802) (Coleoptera: Curculionidae).

The genome sequence of the Northern Grizzled Skipper, Pyrgus centaureae (Rambur, 1839) (Lepidoptera: Hesperiidae).

The genome sequence of a greenbottle fly, Lucilia caesar (Linnaeus, 1758) (Diptera: Calliphoridae).

The genome sequence of the Woodland Grayling, Hipparchia fagi (Scopoli, 1763) (Lepidoptera: Nymphalidae).

The genome sequence of the nematode Ostertagia ostertagi (Stiles, 1892) (Rhabditida, Trichostrongylidae).

The genome sequence of the Figwort Mason Wasp, Symmorphus gracilis (Brulle, 1832) (Hymenoptera: Vespidae).

The genome sequence of the Atlantic white-sided dolphin, Leucopleurus acutus (Gray, 1828) (Artiodactyla: Delphinidae).

The chromosomal genome sequence of the moon jellyfish, Aurelia sp. 4 Dawson et al. 2005 (Semaeostomeae: Ulmaridae) and its associated microbial metagenome sequences.