Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Has reproduction · 89
TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches.
PMID 37013657 · PMC10069131 · Genome biology · 2023 · 6 claims · 6 setups
TrEMOLO combines an assembly-based INSIDER module and a mapping-based OUTSIDER module to detect TE insertions/deletions from long-read sequencing data and estimate their allele frequency
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Full-text index only
The Genomics of Convergent Adaptation to Intertidal Gravel Beaches in Mediterranean Clingfishes.
PMID 41671394 · PMC12951522 · Genome biology and evolution · 2026 · 8 claims · 8 setups
Gouania slender and stout morphotypes evolved convergently at least twice within the genus, confirmed by 3D morphometrics and phylogenomics
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Full-text index only
Comparative Genomics Provide Insight Into the Evolution of European Aphanomyces euteiches Strains.
PMID 41832745 · PMC13044513 · Genome biology and evolution · 2026 · 8 claims · 8 setups
Genome-wide SNP data confirm three genetically distinct A. euteiches populations in Europe, with Italian strains forming a clearly separated group
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Has reproduction · 86
Comprehensive Genomic and Phenotypic Characterization of Escherichia coli O78:H9 Strain HPVN24 Isolated from Diarrheic Poultry in Vietnam.
PMID 41156725 · PMC12565876 · Microorganisms · 2025 · 8 claims · 8 setups
HPVN24 is E. coli APEC serotype O78:H9, sequence type ST23