Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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CSsingle: a unified tool for robust decomposition of bulk and spatial transcriptomic data across diverse single-cell references.
PMID 42080261 · PMC13136905 · Nucleic acids research · 2026 · 8 claims · 8 setups
CSsingle explicitly corrects for cell-type-specific RNA content (cell size) differences using ERCC spike-ins or a novel computational estimator
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A comparison of programmed cell death between species.
PMID 11178240 · PMC138857 · Genome biology · 2000 · 8 claims · 8 setups
The core apoptotic pathway (CED-3/caspases, CED-4/Apaf-1, CED-9/Bcl-2, EGL-1) is conserved across C. elegans, Drosophila, and mammals.
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AgBase: a functional genomics resource for agriculture.
PMID 16961921 · PMC1618847 · BMC genomics · 2006 · 8 claims · 7 setups
AgBase is a curated, web-accessible database providing structural and functional (GO) annotation for agricultural genomes and their pathogens.
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A longitudinal single-cell and spatial multiomic atlas of pediatric high-grade glioma.
PMID 42030938 · PMC13198283 · Cell reports. Medicine · 2026 · 8 claims · 8 setups
A multiomic (snRNA-seq, snATAC-seq, WGS, CODEX) atlas defines a core set of pHGG neoplastic cell states shared across molecular subtypes
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Expression Atlas in 2026: enabling FAIR and open expression data through community collaboration and integration.
PMID 41370097 · PMC12807774 · Nucleic acids research · 2026 · 8 claims · 8 setups
Expression Atlas has expanded to >4500 studies from 67 species, with increased proteomics coverage and updated GTEx tissue profiles