Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Tumor-specific but immunosuppressive CD39(+)CD8(+) T cells exhibit double-faceted roles in clear cell renal cell carcinoma.

  PMID 40961944 · PMC12629791 · Cell reports. Medicine · 2025 · 8 claims · 8 setups

  Has reproduction · 88

  CD39+CD8+ TILs constitute a terminally exhausted, tumor-antigen-specific subset of CD8+ T cells

  memory sorted caix-specific cd39+pd-1bright scrna-seq bulk mhc

• Metabolic quiescence of naive-like memory T cells precedes and maintains antigen-specific T cell memory.

  PMID 41735532 · PMC12956582 · Nature immunology · 2026 · 8 claims · 8 setups

  Full-text index only

  CD8+ T cells upregulate glycolysis to fuel anabolic needs for proliferation but predominantly use oxidative phosphorylation (OXPHOS) for energy production during the acute phase (days 7-28) after YFV vaccination

  peripheral cd8+ ns4b+ antigen-specific flow scrna-seq cite-seq

• HIV-seq reveals gene expression differences between HIV-transcribing cells from viremic and suppressed people with HIV.

  PMID 41776157 · PMC12957429 · Nature communications · 2026 · 7 claims · 8 setups

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  HIV-seq (10x 5' scRNA-seq spiked with HIV-specific capture primers targeting R-U5-pre-gag, pol, tat-rev exon2, Psi, and RRE) increases detection of HIV RNA+ cells and HIV transcripts per cell compared to conventional 5' scRNA-seq

  cd4+ cd8+ pbmcs scrna-seq cite-seq differential