Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Large-scale multi-omics unveils host-microbiome interactions driving root development and nitrogen acquisition.

  PMID 41634153 · PMC12929062 · Nature plants · 2026 · 8 claims · 8 setups

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  Multi-omics integration of root transcriptome, rhizosphere 16S microbiome and root/shoot ionome across 175 B. napus accessions at two field sites links host gene expression to microbiome assembly and nutrient traits

  lateral rhizosphere shoot napus sequencing 16s ionomic

• Dynamic transcriptomic remodeling in grafted human neural progenitor cells uncovers mechanisms for vision preservation in a rat model of retinitis pigmentosa.

  PMID 41792118 · PMC12966429 · Nature communications · 2026 · 8 claims · 7 setups

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  Grafted hNPCs primarily differentiate into an astroglial phenotype and mature over time in the degenerative retinal environment

  grafted rcs hnpcs single-cell electroretinography immunofluorescence

• Colocalization and potential interactions of Endozoicomonas and chlamydiae in microbial aggregates of the coral Pocillopora acuta.

  PMID 37196086 · PMC11809670 · Science advances · 2023 · 8 claims · 8 setups

  Has reproduction · 85

  CAMAs are located in the epidermis of the tentacle tips of P. acuta polyps

  pocillopora acuta lcm-isolated whole-mount fish transmission

• In vivo dual RNA-Seq uncovers key effectors of epithelial barrier disruption by an extracellular pathogen.

  PMID 41634022 · PMC12966279 · Nature communications · 2026 · 8 claims · 8 setups

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  Dual RNA-Seq of L. interrogans-infected hamsters reveals the in vivo host-pathogen transcriptomic landscape during infection

  golden interrogans hamster epithelial dual rna-seq qpcr

• Orientia tsutsugamushi targets lamin A using Ank effectors and alters chromatin to inhibit NF-κB.

  PMID 41965450 · PMC13254291 · Communications biology · 2026 · 8 claims · 7 setups

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  O. tsutsugamushi impairs NF-κB nuclear accumulation by targeting lamin A using multiple Ank effectors

  hela ank1 pranc-containing co-immunoprecipitation confocal nf-κb-dependent

• Glioblastoma invasion into different organoid hosts reveals cell-intrinsic and proliferative migratory programs.

  PMID 41959666 · PMC13059114 · iScience · 2026 · 8 claims · 8 setups

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  GB cells invade both neural and endodermal organoid hosts (lineage-independent), whereas non-malignant neural progenitor cells show markedly reduced infiltration

  gbm1 gfp-gbm1 facs-sorted post-invasion image-based immunofluorescence single-cell