Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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TEDD: a comprehensive database for translation efficiency dynamics.
PMID 41217970 · PMC12807600 · Nucleic acids research · 2026 · 8 claims · 4 setups
TEDD integrates 1518 RNA-seq, Ribo-seq, and RNC-seq samples from 143 human projects (279 datasets) spanning 24 tissues/cell types, 74 cell lines, and 52 conditions.
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Has reproduction · 81
Ribosome A and P sites revealed by length analysis of ribosome profiling data.
PMID 25805170 · PMC4402525 · Nucleic acids research · 2015 · 7 claims · 8 setups
Accounting for variation in ribosome footprint lengths, by aligning footprints to the correct end, reveals the ribosome A and P site locations.
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Splicing variants in MYRF cause partial loss of function in the retinal pigment epithelium leading to nanophthalmos.
PMID 41746734 · PMC13043084 · JCI insight · 2026 · 8 claims · 8 setups
The dG-MYRF C-terminal frameshift variant undergoes normal homotrimerization, cleavage, and nuclear localization but shows reduced steady-state levels of the C-terminal cleavage product and decreased transcriptional activation of target genes.
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Alternative splicing-triggered mRNA decay informs splice-switching targets for neurodevelopmental disorders.
PMID 41678398 · PMC13078869 · The Journal of clinical investigation · 2026 · 7 claims · 12 setups
EANMD, a new computational tool, identifies AS-NMD exons using the 50 nt rule plus additional transcript-level features and outperforms existing tools (SpliceTools, NMD Classifier)