Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 5

System / cell line: scrna-seq ✕ Assay: diagnostic ✕ Clear

Single-cell multiomics analysis of chronic myeloid leukemia links cellular heterogeneity to therapy response.

PMID 39503729 · PMC11540304 · eLife · 2024 · 8 claims · 5 setups

Has reproduction · 75

CITE-seq multiomics reveals that each CML patient harbors a unique composition of stem and progenitor cells at diagnosis

lin-cd34+ cml cite-seq facs differential
LRP1 as a potential diagnostic and immunomodulatory target in endometriosis: evidence from multi-omics and single-cell analyses.

PMID 42064072 · PMC13124487 · Frontiers in immunology · 2026 · 7 claims · 8 setups

Has reproduction · 49

LRP1 is the top hub gene with the highest diagnostic performance for distinguishing ectopic from eutopic endometrium in EMS

ectopic geo training gwas microarray wgcna machine
T Cells With Activated STAT4 Drive the High-Risk Rejection State to Renal Allograft Failure After Kidney Transplantation.

PMID 35844542 · PMC9283858 · Frontiers in immunology · 2022 · 8 claims · 8 setups

Has reproduction · 78

Unsupervised UMAP/Leiden clustering of 2,611 microarray datasets reveals 6 rejection states that diverge from traditional Banff clinical classification

kidney scrna-seq microarray meblack microarray single-cell scissor
Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension.

PMID 38528047 · PMC10963360 · Scientific reports · 2024 · 7 claims · 7 setups

Has reproduction · 71

HIV-1 and PAH share 109 co-expressed genes primarily enriched in type I interferon (IFN) pathways.

pbmc shared gene microarray kegg
Integrative transcriptomics and single-cell transcriptomics analyses reveal potential biomarkers and mechanisms of action in papillary thyroid carcinoma.

PMID 40520228 · PMC12162626 · Frontiers in genetics · 2025 · 8 claims · 8 setups

Has reproduction · 49

ENTPD1, SERPINA1, and TACSTD2 are potential transcriptomic biomarkers for PTC

ptc degs key bulk kegg weighted

Experiments

Single-cell multiomics analysis of chronic myeloid leukemia links cellular heterogeneity to therapy response.

LRP1 as a potential diagnostic and immunomodulatory target in endometriosis: evidence from multi-omics and single-cell analyses.

T Cells With Activated STAT4 Drive the High-Risk Rejection State to Renal Allograft Failure After Kidney Transplantation.

Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension.

Integrative transcriptomics and single-cell transcriptomics analyses reveal potential biomarkers and mechanisms of action in papillary thyroid carcinoma.