Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Capsular specificity in temperate phages of Klebsiella pneumoniae is driven by diverse receptor-binding enzymes.
PMID 42048315 · PMC13123978 · PLoS biology · 2026 · 8 claims · 5 setups
Capsular specificity in temperate K. pneumoniae phages is driven by structurally diverse prophage-encoded receptor-binding enzymes, including classical β-helix depolymerases, SGNH-domain hydrolases, and structurally novel RBPs.
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AMR-GNN: a multi-representation graph neural network framework to enable genomic antimicrobial resistance prediction.
PMID 41792137 · PMC13087051 · Nature communications · 2026 · 7 claims · 8 setups
AMR-GNN, a graph neural network integrating multiple genomic representations (unitigs, SNPs, FCGR) via low-rank multimodal fusion, improves AMR phenotype prediction in P. aeruginosa compared to single-representation baseline models.
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Has reproduction · 58
Investigating epigenetic biomarkers of age, sex, and disease in captive South African cheetahs (Acinonyx jubatus jubatus).
PMID 41528985 · PMC12798976 · PloS one · 2026 · 8 claims · 7 setups
A cheetah-specific epigenetic clock (CheetahClock) built from 52 CpG sites predicts age across blood and liver samples with r=0.97 and MAE=0.86 years
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Protocol to perform cell-type-specific transcriptome-wide association study using scPrediXcan framework.
PMID 41689808 · PMC12925207 · STAR protocols · 2026 · 6 claims · 6 setups
scPrediXcan enables cell-type-specific transcriptome-wide association studies (TWAS) by integrating deep learning-based prediction of gene expression from DNA sequence and epigenetic features.