Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• A high-resolution spatial map of cilia-associated proteins in the human fallopian tube.

  PMID 42010243 · PMC13096173 · Nature communications · 2026 · 6 claims · 7 setups

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  310 genes show elevated expression in the human fallopian tube compared to other tissues, the majority associated with motile cilium structure/function.

  fallopian ft-elevated tma comparison bulk single-cell gene

• Venezuelan equine encephalitis virus infection causes chronic neurobehavioral outcomes, cellular remodeling, and hippocampal single-cell transcriptomic changes.

  PMID 41950299 · PMC13089902 · PLoS pathogens · 2026 · 7 claims · 8 setups

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  VEEV infection causes persistent motor dysfunction, memory impairment, and reduced anxiety-like behavior up to 106 DPI

  c57bl pooled hippocampal scrna-seq elevated novel modified

• Confounding factors in assessing the enriched expression of somatic mutant alleles in bulk tumor samples.

  PMID 41781335 · PMC13138019 · Genome research · 2026 · 8 claims · 8 setups

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  Mutation-based ASE detection in bulk tumor samples can be confounded by gene expression differences between tumor and normal cells, producing apparent enrichment of the mutant allele in RNA without true ASE.

  tcga cutaneous serially whole-exome bulk novo

• Cell neighborhood topology directs rare cell population identification.

  PMID 41912521 · PMC13199379 · Nature communications · 2026 · 8 claims · 8 setups

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  RareQ is a framework that quantifies neighborhood connectivity (Q), a cell-specific measure of kNN-graph cliquishness, to detect rare cell populations from single-cell and spatial omics data

  downsampled pbmc brain simulated scrna-seq cite-seq single-cell