Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 6

System / cell line: mixture ✕ Assay: extraction ✕ Clear

Cell fixation and preservation for droplet-based single-cell transcriptomics.

PMID 28526029 · PMC5438562 · BMC biology · 2017 · 7 claims · 8 setups

Has reproduction · 91

Methanol fixation stabilizes and preserves dissociated cells for weeks without compromising single-cell RNA-seq data quality

hek293 dissociated facs-sorted hek drop-seq bulk trizol
An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.

PMID 33247935 · PMC7698665 · Database : the journal of biological databases and curation · 2020 · 8 claims · 6 setups

Has reproduction · 75

GETc enables discovery and visualization of time-course gene expression data and analytical results from GEO

geo time-course researcher filtered regular metamap ode-based
High quality catalog of proteotypic peptides from human heart.

PMID 18803417 · PMC2765113 · Journal of proteome research · 2008 · 8 claims · 4 setups

Full-text index only

A catalog of 4476 proteotypic peptides representing 2558 human heart proteins was generated from MudPIT analyses of nonfailing and failing left-ventricular explants

left-ventricular unfractionated heart mudpit selected preparation
Contrasting nutrient retention in alpine soils: the role of soil microbiome in phosphorus and nitrogen mobility in scree and meadow environments.

PMID 41632073 · PMC12883989 · FEMS microbiology ecology · 2026 · 8 claims · 8 setups

Has reproduction · 63

Scree soils exhibit high concentrations of mobile nitrate and phosphate, low phosphate sorption ability, and significantly greater phosphorus leaching despite lower organic matter content and microbial biomass than meadow soils.

scree elemental colorimetric soil
Perspectives of targeted mass spectrometry for protein biomarker verification.

PMID 19818677 · PMC2795387 · Current opinion in chemical biology · 2009 · 8 claims · 8 setups

Full-text index only

SRM/MRM mass spectrometry can quantify targeted proteotypic peptides as surrogates for candidate biomarker proteins in complex plasma samples

proteins standard plasma sera srm multiplexed immunoaffinity-srm
Optimizing data-driven excellence: Canada's approach to using pathogen test datasets for quality control, pipeline development and training initiatives.

PMID 41591806 · PMC12847982 · Microbial genomics · 2026 · 8 claims · 5 setups

Full-text index only

Standardized SARS-CoV-2 test datasets (Illumina and Nanopore) were developed as benchmarks for validating sequencing/bioinformatics pipelines across Canadian public health labs

sars-cov-2 extracted nasopharyngeal bioinformatic whole-genome triplex extraction

Experiments

Cell fixation and preservation for droplet-based single-cell transcriptomics.

An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.

High quality catalog of proteotypic peptides from human heart.

Contrasting nutrient retention in alpine soils: the role of soil microbiome in phosphorus and nitrogen mobility in scree and meadow environments.

Perspectives of targeted mass spectrometry for protein biomarker verification.

Optimizing data-driven excellence: Canada's approach to using pathogen test datasets for quality control, pipeline development and training initiatives.