Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Multiomics and deep learning dissect regulatory syntax in human development.

  PMID 41951735 · PMC13216069 · Nature · 2026 · 8 claims · 8 setups

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  The Human Development Multiomic Atlas (HDMA) is a single-cell atlas of chromatin accessibility and gene expression from 817,740 fetal cells across 12 organs, spanning 203 cell types

  fetal annotated embryo chrombpnet share-seq chromvar activity-by-contact

• MiR-21-5p Protects Embryonic Growth and Heart Function During Developmental Hypoxia by Dampening HIF Responses and Altering Gene Expression.

  PMID 42138560 · PMC13178401 · Comprehensive Physiology · 2026 · 8 claims · 7 setups

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  Hypoxia induces widespread transcriptomic remodeling in neonatal rat cardiomyocytes (385 DEGs vs normoxia)

  neonatal chicken fetal tunel long-read exon-level

• scSNViz: visualization and analysis of cell-specific expressed SNVs.

  PMID 41533688 · PMC12866635 · Bioinformatics (Oxford, England) · 2026 · 7 claims · 7 setups

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  scSNViz is an R package for exploration, quantification, and visualization of expressed SNVs from cell-barcoded scRNA-seq data, supporting VAF estimation, SNV clustering, and 2D/3D visualization.

  prostate non-small cholangiocarcinoma neuroblastoma scrna-seq cell-level single-cell