Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Metappuccino: large language model-driven reconstruction of sequence read archive metadata for cancer research.

  PMID 42057294 · PMC13148957 · Bioinformatics (Oxford, England) · 2026 · 8 claims · 3 setups

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  Metappuccino reconstructs 19 metadata classes by combining deterministic rule-based extraction/normalization (for explicit context) with LoRA-specialized Mistral-7B-Instruct completion (for missing/ambiguous fields)

  ncbi sra metadata llm-based rule-based

• Conserved gene clusters in entomopathogenic filamentous fungi.

  PMID 42047519 · PMC13123250 · Genetics and molecular biology · 2026 · 8 claims · 6 setups

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  Most gene cluster families (GCFs) identified across Hypocreales are genus-specific or orphaned (singletons) rather than broadly conserved

  hypocreales predicted selected gcf genome gene fine