Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
-
Full-text index only
Very high CO(2) concentrations inhibit photosynthesis and trigger transcriptomic stress responses in cyanobacteria.
PMID 41524024 · PMC12789804 · NAR genomics and bioinformatics · 2026 · 7 claims · 2 setups
At 30% CO2, genes encoding CO2 uptake mechanisms, photosynthetic electron transfer, and light-harvesting antennae proteins are down-regulated compared to lower CO2 concentrations
-
Full-text index only
Benchmarking component choices for unpaired single cell RNA and epigenomic integration.
PMID 41987329 · PMC13192178 · Genome biology · 2026 · 7 claims · 8 setups
Gene activity scores (GAS) show limited correlation with actual gene expression but effectively preserve cellular neighborhood structure and support clustering.
-
Has reproduction · 57
Data-driven projections of candidate enhancer-activating SNPs in immune regulation.
PMID 40011812 · PMC11863423 · BMC genomics · 2025 · 7 claims · 7 setups
A data-driven computational protocol combining motif scanning, open-chromatin filtering, gene proximity, dbSNP validation, spacing, and cross-species conservation can prioritize SNPs likely to create functional GAS motifs.
-
Has reproduction · 50
Metabolic features that select for Bathyarchaeia in modern ferruginous lacustrine subsurface sediments.
PMID 39660009 · PMC11631310 · ISME communications · 2024 · 8 claims · 8 setups
Microbial assemblages shift with depth from iron- and sulfate-reducing bacteria to fermentative anaerobes and methanogens, with Bathyarchaeia selected below the sulfate reduction zone as cell densities exponentially decrease