Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies.
PMID 41896736 · PMC13147680 · BMC microbiology · 2026 · 7 claims · 8 setups
BaGPipe is an automated, reproducible Nextflow pipeline that integrates pre-processing, Pyseer-based association analysis, and downstream visualisation into a unified bacterial GWAS workflow
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Estrogen Production in Pancreatic Cancer Shapes a Tumor-Suppressive Stromal Microenvironment.
PMID 41258799 · PMC12862343 · Cancer research · 2026 · 8 claims · 6 setups
Serum levels of stromal biomarkers associated with favorable outcomes were significantly higher in female patients with PDAC than in male patients
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Has reproduction · 73
Detecting aberrant DNA methylation in Illumina DNA methylation arrays: a toolbox and recommendations for its use.
PMID 37218167 · PMC10208159 · Epigenetics · 2023 · 8 claims · 8 setups
Developed OutlierMeth, an R package that computes probe-specific thresholds and flags DNA methylation outliers from array data
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DNA methylation biomarkers-based pan-cancer classifier: predictive modeling for cancer classification.
PMID 42152108 · PMC13185202 · Genome medicine · 2026 · 8 claims · 5 setups
Relatively simple ML models (logistic regression) outperform complex algorithms such as deep neural networks for methylation-based cancer classification