Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• CeLLTra: aligning cell names with gene expression via a pathway-informed transformer.

  PMID 41652996 · PMC12881829 · Bioinformatics (Oxford, England) · 2026 · 8 claims · 4 setups

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  Grouping genes into pathway-defined gene sets as Transformer input tokens (instead of using individual genes or discretized bins) mitigates the long-sequence problem and improves representation learning of scRNA-Seq gene expression profiles.

  tabula tumor-infiltrating scrna-seq

• Protocadherin 20 Is a POU Class 2 Homeobox 3 Target Gene Required for Proper Tuft Cell Microvillus Organization.

  PMID 41619969 · PMC13051935 · Cellular and molecular gastroenterology and hepatology · 2026 · 8 claims · 8 setups

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  POU2F3 ChIP-seq in isolated murine tuft cells identifies high-confidence POU2F3 binding sites/target genes enriched at gene promoters and the POU consensus motif

  facs-isolated pou2f3 duodenal non-small-cell chip-seq novo bulk