Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 4

System / cell line: structures ✕ Assay: gfp ✕ Clear

Double-strand breaks in the myotonic dystrophy type 1 and the fragile X syndrome triplet repeat sequences induce different types of mutations in DNA flanking sequences in Escherichia coli.

PMID 17012280 · PMC1636463 · Nucleic acids research · 2006 · 7 claims · 5 setups

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DSBs induced at the TRS/vector junction (EcoRV site) generate numerous mutagenic events in flanking sequences, whereas DSBs within the repeat tract (EcoRI site) produce no such mutants

coli plasmids plasmid white plasmid sequencing non-b
Functional genomics analysis of developing zebrafish and human endoderm reveals highly conserved cis-regulatory modules acting during vertebrate organogenesis.

PMID 41781333 · PMC7619044 · Genome research · 2026 · 8 claims · 8 setups

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There are few endoderm-specific CRMs; many CRMs governing pancreas development also likely act within the nervous system

zebrafish embryonic atac-seq bulk facs
A naturally occurring human RPA subunit homolog does not support DNA replication or cell-cycle progression.

PMID 19942684 · PMC2817474 · Nucleic acids research · 2010 · 8 claims · 7 setups

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Exogenous RPA4 expression does not support chromosomal DNA replication and causes cell-cycle arrest in G2/M

hela mammalian rpa4 western flow immunofluorescence
The macrophage entry mechanism of SARS-CoV-2 mediated by surface CD98/TMPRSS11E complex is associated with the cellular tropism toward proinflammatory M1 and pathogenesis.

PMID 41877147 · PMC13137717 · Respiratory research · 2026 · 8 claims · 8 setups

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CD98 (CD98hc/SLC3A2) is a novel receptor for the SARS-CoV-2 Spike protein

thp-1-derived 293t structures thp-1 co-ip co-immunoprecipitation molecular

Experiments

Double-strand breaks in the myotonic dystrophy type 1 and the fragile X syndrome triplet repeat sequences induce different types of mutations in DNA flanking sequences in Escherichia coli.

Functional genomics analysis of developing zebrafish and human endoderm reveals highly conserved cis-regulatory modules acting during vertebrate organogenesis.

A naturally occurring human RPA subunit homolog does not support DNA replication or cell-cycle progression.

The macrophage entry mechanism of SARS-CoV-2 mediated by surface CD98/TMPRSS11E complex is associated with the cellular tropism toward proinflammatory M1 and pathogenesis.