Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Chromatin state architecture governs transcription factor accessibility across plant genomes.

  PMID 41570051 · PMC12867329 · PLoS genetics · 2026 · 8 claims · 8 setups

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  Chromatin states show a large degree of functional conservation between Arabidopsis thaliana and Marchantia polymorpha across more than 450 million years of land plant evolution

  arabidopsis marchantia chromhmm atac-seq antibody-based

• Transcription-coupled and epigenome-encoded mechanisms direct H3K4 methylation.

  PMID 35953471 · PMC9372134 · Nature communications · 2022 · 8 claims · 8 setups

  Has reproduction · 83

  ATX1, ATX2, and ATXR7 redundantly mediate H3K4 monomethylation genome-wide

  arabidopsis chip-seq western random

• Exonic enhancers are a widespread class of dual-function regulatory elements.

  PMID 41927541 · PMC13216554 · Nature communications · 2026 · 8 claims · 8 setups

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  Many protein-coding exons possess enhancer activity across species, forming a class of candidate Exonic Enhancers (cEEs)

  coding k-562 cloned garre1 chip-seq dnase histone