Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Full-text index only
Genome-wide analyses of retrogenes derived from the human box H/ACA snoRNAs.
PMID 17175533 · PMC1802619 · Nucleic acids research · 2007 · 8 claims · 6 setups
202 novel box H/ACA RNA-related sequences were identified in the human genome
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Full-text index only
Identification of novel homologous microRNA genes in the rhesus macaque genome.
PMID 18186931 · PMC2254598 · BMC genomics · 2008 · 8 claims · 2 setups
454 rhesus miRNA genes were identified in total, including 383 novel genes in addition to 71 previously reported
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Has reproduction · 95
Identification and Characterization of Small Noncoding RNAs in Genome Sequences of the Edible Fungus Pleurotus ostreatus.
PMID 27703969 · PMC5040776 · BioMed research international · 2016 · 7 claims · 8 setups
Genome-scale identification detected 254 small noncoding RNAs (snRNAs, snoRNAs, tRNAs, miRNAs, and other Rfam-classified sncRNAs) in the P. ostreatus CCEF00389 genome assembly
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Has reproduction · 71
Systematic and computational identification of Androctonus crassicauda long non-coding RNAs.
PMID 33633149 · PMC7907363 · Scientific reports · 2021 · 8 claims · 6 setups
13,401 lncRNAs were identified in the A. crassicauda transcriptome using the ECF pipeline
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Has reproduction · 61
A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum.
PMID 25392735 · PMC4228822 · GigaScience · 2014 · 8 claims · 8 setups
T. melanosporum shows a high rate of cytosine methylation (>44%) that selectively targets transposable elements rather than genes, with a strong preference for CpG sites.